ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 5061.00 70.56 8.37 100.0 MEG8-240 lncRNA uterus (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 71.00 0.29 0.12 100.0 SNHG14-303 lncRNA uterus (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 10.00 0.53 0.02 100.0 SNHG14-306 lncRNA uterus (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 100.00 5.27 0.17 100.0 SNHG14-306 lncRNA uterus (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 1205.00 63.55 1.99 98.29 SNHG14-306 lncRNA uterus (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 79.00 4.17 0.13 100.0 SNHG14-306 lncRNA uterus (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 4.00 0.02 0.01 100.0 ENST00000666735 lncRNA uterus (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 9914.00 61.42 16.40 100.0 ENST00000666735 lncRNA uterus (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 14062.00 83.92 23.26 100.0 MEG8-242 lncRNA uterus (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 12264.14 24.08 20.29 34.68 SNHG14-312 lncRNA uterus (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 23709.61 46.56 39.22 67.04 SNHG14-312 lncRNA uterus (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 2177.00 4.27 3.60 100.0 SNHG14-312 lncRNA uterus (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 1010.00 1.78 1.67 100.0 MEG8-244 lncRNA uterus (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 1447.00 2.55 2.39 100.0 MEG8-244 lncRNA uterus (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 50986.00 89.80 84.35 99.95 MEG8-244 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 492.00 0.01 0.81 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 2.00 0.00 0.00 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 8674.00 0.25 14.35 99.14 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 1284.50 0.04 2.12 43.77 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 8828.00 0.25 14.60 83.19 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 1903093.00 54.51 3148.31 98.55 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 3148.00 0.09 5.21 76.3 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 255284.00 7.31 422.32 99.66 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 11839.00 0.34 19.59 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 120481.00 3.45 199.31 99.0 SNHG1-248 lncRNA uterus (Tissue)