ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 493386.00 16.85 816.21 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 464.00 0.02 0.77 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 12391.00 0.42 20.50 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 45687.00 1.56 75.58 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1641_1722_+ 1641–1722 4.00 0.00 0.01 80.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 272.00 0.01 0.45 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 1504.00 25.25 2.49 100.0 FTX-219 lncRNA uterus (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 1218.00 20.45 2.01 82.97 FTX-219 lncRNA uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 115.00 2.88 0.19 37.22 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 33.00 0.83 0.05 31.13 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 954.00 23.92 1.58 64.9 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 194.00 4.86 0.32 62.78 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 905.00 22.69 1.50 81.83 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 104.00 2.61 0.17 100.0 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 281.00 7.05 0.46 100.0 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 226.00 5.67 0.37 100.0 CTC1-214 protein coding uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 14447.00 3.65 23.90 70.91 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 5261.00 1.33 8.70 98.34 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 7012.00 1.77 11.60 100.0 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 20902.00 5.27 34.58 51.3 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 4446.00 1.12 7.36 100.0 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 6540.00 1.65 10.82 100.0 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 1503.00 0.38 2.49 100.0 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 6916.00 1.75 11.44 100.0 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 6806.00 1.72 11.26 100.0 ENST00000651540 lncRNA uterus (Tissue)