ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 5893.00 1.95 9.75 55.83 SNHG14-224 lncRNA uterus (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 2310.74 26.14 3.82 73.61 5S_rRNA.20-201 rRNA pseudogene uterus (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 540.00 5.30 0.89 100.0 HSPA9-211 retained intron uterus (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 402.00 3.94 0.67 13.54 HSPA9-211 retained intron uterus (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 118687.00 89.49 196.35 100.0 DNM3OS-205 lncRNA uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 294.00 0.01 0.49 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 2283.00 0.08 3.78 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 8748.00 0.30 14.47 81.05 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 16764.00 0.57 27.73 92.95 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 19.00 0.00 0.03 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 4133.00 0.14 6.84 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 1191.00 0.04 1.97 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 2077119.00 70.96 3436.20 99.8 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 2604.00 0.09 4.31 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 11889.00 0.41 19.67 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 3218.00 0.11 5.32 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 2170.00 0.07 3.59 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 4552.00 0.16 7.53 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 1098.00 0.04 1.82 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 517.00 0.02 0.86 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 949.00 0.03 1.57 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 19053.00 0.65 31.52 83.59 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 5001.00 0.17 8.27 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 33824.00 1.16 55.96 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 77106.00 2.63 127.56 97.19 GAS5-230 retained intron uterus (Tissue)