ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 4202.81 1.66 6.95 45.38 U2.3-201 snRNA uterus (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 6051.00 2.56 10.01 100.0 U2.6-201 snRNA uterus (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 785.00 0.74 1.30 42.25 ENST00000619323 lncRNA uterus (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 102211.00 96.15 169.09 98.26 ENST00000619323 lncRNA uterus (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 214.00 8.13 0.35 100.0 SCARNA4-202 scaRNA uterus (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 2227.00 74.38 3.68 100.0 ENST00000625572 miRNA uterus (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 55380.00 91.47 91.62 100.0 ENST00000628177 snoRNA uterus (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 1751.00 85.54 2.90 100.0 ENST00000630615 snoRNA uterus (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 29.00 9.09 0.05 100.0 DMRT2-209 protein coding uterus (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 144.00 45.14 0.24 100.0 DMRT2-209 protein coding uterus (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 870.00 11.86 1.44 100.0 SNORD98-201 snoRNA uterus (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 4529.00 61.72 7.49 100.0 SNORD98-201 snoRNA uterus (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 179826.05 43.26 297.49 45.68 MIR106AHG-201 lncRNA uterus (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 128.09 0.03 0.21 15.97 MIR106AHG-201 lncRNA uterus (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 319.00 0.08 0.53 100.0 MIR106AHG-201 lncRNA uterus (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 615.99 0.15 1.02 76.81 MIR106AHG-201 lncRNA uterus (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 938.00 7.35 1.55 100.0 MEG8-222 lncRNA uterus (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 7022.00 55.01 11.62 100.0 MEG8-222 lncRNA uterus (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 14039.00 4.64 23.22 95.33 SNHG14-224 lncRNA uterus (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 200457.00 66.24 331.62 90.98 SNHG14-224 lncRNA uterus (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 11959.00 3.95 19.78 100.0 SNHG14-224 lncRNA uterus (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 1012.00 0.33 1.67 87.54 SNHG14-224 lncRNA uterus (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 469.00 0.15 0.78 100.0 SNHG14-224 lncRNA uterus (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 5069.00 1.68 8.39 48.71 SNHG14-224 lncRNA uterus (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 9893.00 3.27 16.37 79.28 SNHG14-224 lncRNA uterus (Tissue)