ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 5221.00 0.86 8.64 50.36 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 2213.00 0.36 3.66 63.67 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 1425.00 0.23 2.36 24.9 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 198.00 0.03 0.33 100.0 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 5619.00 0.92 9.30 29.84 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 75030.00 12.33 124.12 72.27 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 16379.00 2.69 27.10 70.24 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 1779.00 0.29 2.94 68.11 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 9308.00 1.53 15.40 82.49 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 46526.00 7.64 76.97 50.42 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 215.00 0.04 0.36 100.0 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 280854.00 46.15 464.62 94.94 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 1278.00 0.21 2.11 100.0 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_343_434_+ 343–434 24.00 0.00 0.04 100.0 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 1638.00 0.27 2.71 100.0 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 178864.00 95.86 295.90 100.0 RPS8-207 protein coding CDS not defined uterus (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 319.00 7.37 0.53 100.0 RPL7A-206 protein coding CDS not defined uterus (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 919.00 21.24 1.52 100.0 RPL7A-206 protein coding CDS not defined uterus (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 363.00 8.39 0.60 100.0 RPL7A-206 protein coding CDS not defined uterus (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 664100.00 93.86 1098.63 99.72 RPL21-209 retained intron uterus (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 3281.00 0.46 5.43 100.0 RPL21-209 retained intron uterus (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 593.00 0.08 0.98 100.0 RPL21-209 retained intron uterus (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 1911.00 0.27 3.16 100.0 RPL21-209 retained intron uterus (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 27878.00 3.94 46.12 97.5 RPL21-209 retained intron uterus (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 436.00 35.45 0.72 100.0 GABRE-209 retained intron uterus (Tissue)