ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 207.00 0.07 0.42 100.0 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 153787.68 51.52 314.76 62.61 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 16134.00 5.40 33.02 86.02 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 182.00 0.06 0.37 100.0 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 2459.00 0.82 5.03 100.0 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 131.00 0.04 0.27 100.0 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 5573.00 1.87 11.41 99.52 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 3516.00 3.23 7.20 82.28 SNHG14-323 lncRNA temporal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 950.00 0.33 1.94 73.42 MEG8-251 lncRNA temporal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 265582.00 93.21 543.58 99.21 MEG8-251 lncRNA temporal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 547.00 0.19 1.12 44.33 MEG8-251 lncRNA temporal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 5517.00 1.94 11.29 91.39 MEG8-251 lncRNA temporal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 1224.00 0.43 2.51 100.0 MEG8-251 lncRNA temporal lobe (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 49037.00 57.85 100.37 87.61 SNHG14-336 lncRNA temporal lobe (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 29230.00 34.48 59.83 60.7 SNHG14-336 lncRNA temporal lobe (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 27164.00 63.75 55.60 94.28 SNHG14-341 lncRNA temporal lobe (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 1089.00 32.64 2.23 100.0 NCL-211 retained intron temporal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 17.00 0.22 0.03 100.0 LINC02739-203 lncRNA temporal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 33.00 0.43 0.07 33.0 LINC02739-203 lncRNA temporal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 1875.00 24.17 3.84 100.0 LINC02739-203 lncRNA temporal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 1001.00 12.90 2.05 100.0 LINC02739-203 lncRNA temporal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 30.00 0.39 0.06 100.0 LINC02739-203 lncRNA temporal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 67.00 0.86 0.14 67.0 LINC02739-203 lncRNA temporal lobe (Tissue)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 152878.00 88.97 312.90 100.0 MIR124-1HG-216 lncRNA temporal lobe (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 205.00 10.81 0.42 100.0 SNHG10-212 lncRNA temporal lobe (Tissue)