ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 417.00 0.02 0.85 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 8820.00 0.39 18.05 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 324.00 0.01 0.66 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 4683.00 0.21 9.58 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 64780.00 2.88 132.59 68.73 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 2968.00 0.13 6.07 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 312970.00 13.90 640.57 96.92 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 5463.00 0.24 11.18 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 1960.00 0.09 4.01 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 6.00 0.00 0.01 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 144713.00 6.43 296.19 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 10122.00 0.45 20.72 79.64 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 587.73 0.03 1.20 52.85 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 51.00 0.00 0.10 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 10572.00 0.47 21.64 66.44 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 3315.00 0.15 6.78 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 9452.00 0.42 19.35 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 1282.00 0.06 2.62 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 255243.00 39.24 522.42 100.0 SNHG14-315 lncRNA temporal lobe (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 145363.00 22.35 297.52 88.18 SNHG14-315 lncRNA temporal lobe (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 151383.00 23.27 309.84 84.81 SNHG14-315 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 1.00 0.00 0.00 33.33 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 2924.00 0.98 5.98 100.0 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 89797.23 30.08 183.79 39.88 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 178.00 0.06 0.36 100.0 SNHG5-273 lncRNA temporal lobe (Tissue)