ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 2145.00 1.06 4.39 100.0 SNORD69-201 snoRNA temporal lobe (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 186222.00 92.01 381.15 100.0 SNORD69-201 snoRNA temporal lobe (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 1231.00 45.39 2.52 67.56 SNORD70-201 snoRNA temporal lobe (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 4929.00 69.16 10.09 86.1 B4GALNT2-202 protein coding temporal lobe (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 246.00 3.45 0.50 100.0 B4GALNT2-202 protein coding temporal lobe (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 5023.00 89.47 10.28 100.0 NDE1-202 protein coding temporal lobe (Tissue)
ENST00000401172.1 ENST00000401172.1_46_67_+ 46–67 20.00 90.91 0.04 100.0 MIR208B-201 miRNA temporal lobe (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 126.00 59.15 0.26 100.0 MIR450B-201 miRNA temporal lobe (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 499.00 54.42 1.02 100.0 MIR887-201 miRNA temporal lobe (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 5430.00 90.64 11.11 100.0 MIR889-201 miRNA temporal lobe (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 5007.00 79.58 10.25 100.0 SNORD111-201 snoRNA temporal lobe (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 4499.00 57.86 9.21 78.43 SNORD88A-201 snoRNA temporal lobe (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 534.00 93.52 1.09 100.0 MIR548K-201 miRNA temporal lobe (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 763.00 57.67 1.56 100.0 MIR320B2-201 miRNA temporal lobe (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 729.00 91.35 1.49 100.0 MIR1271-201 miRNA temporal lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1224.00 1.71 2.51 100.0 SNORD100-201 snoRNA temporal lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 86.00 0.12 0.18 100.0 SNORD100-201 snoRNA temporal lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 270.00 0.38 0.55 100.0 SNORD100-201 snoRNA temporal lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 65556.00 91.83 134.18 100.0 SNORD100-201 snoRNA temporal lobe (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 3846.00 47.76 7.87 100.0 SNORD111B-201 snoRNA temporal lobe (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 4677.00 36.64 9.57 100.0 RNU2-36P-201 snRNA temporal lobe (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 129.00 1.01 0.26 100.0 RNU2-36P-201 snRNA temporal lobe (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 513.00 0.95 1.05 100.0 SNORD19C-201 snoRNA temporal lobe (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 49482.00 91.60 101.28 98.78 SNORD19C-201 snoRNA temporal lobe (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 217085.00 89.33 444.32 98.87 SNORD12B-201 snoRNA temporal lobe (Tissue)