ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 217085.00 89.33 444.32 98.87 SNORD12B-201 snoRNA temporal lobe (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 2470.00 1.02 5.06 100.0 SNORD12B-201 snoRNA temporal lobe (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 5173.00 13.76 10.59 100.0 Y_RNA.609-201 misc RNA temporal lobe (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 1750.00 23.39 3.58 100.0 Y_RNA.612-201 misc RNA temporal lobe (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 3283.00 2.68 6.72 100.0 SNORD71-201 snoRNA temporal lobe (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 1025.00 0.84 2.10 100.0 SNORD71-201 snoRNA temporal lobe (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 108382.00 88.49 221.83 98.21 SNORD71-201 snoRNA temporal lobe (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 1946.00 14.78 3.98 55.32 MIR194-2HG-201 lncRNA temporal lobe (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 9913.00 75.30 20.29 92.24 MIR194-2HG-201 lncRNA temporal lobe (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 7.00 0.03 0.01 100.0 LINC01783-201 lncRNA temporal lobe (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 7.00 63.64 0.01 100.0 RPS7P15-201 processed pseudogene temporal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 362.00 1.46 0.74 100.0 SNORD62B-201 snoRNA temporal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 219.00 0.88 0.45 100.0 SNORD62B-201 snoRNA temporal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 6545.00 26.41 13.40 100.0 SNORD62B-201 snoRNA temporal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 3107.00 12.54 6.36 87.99 SNORD62B-201 snoRNA temporal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 3504.00 14.14 7.17 100.0 SNORD62B-201 snoRNA temporal lobe (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 30.00 71.43 0.06 100.0 MRPL32-203 nonsense mediated decay temporal lobe (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 1920.00 97.12 3.93 100.0 ENST00000436739 lncRNA temporal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 3241.00 8.78 6.63 100.0 TMEM107-204 protein coding temporal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1267_+ 1182–1267 1888.00 5.11 3.86 100.0 TMEM107-204 protein coding temporal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 2140.00 5.80 4.38 43.02 TMEM107-204 protein coding temporal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 64.00 0.17 0.13 100.0 TMEM107-204 protein coding temporal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 293.00 0.79 0.60 58.6 TMEM107-204 protein coding temporal lobe (Tissue)
ENST00000448136.6 ENST00000448136.6_1026_1098_+ 1026–1098 717.00 18.76 1.47 100.0 SNHG16-201 lncRNA temporal lobe (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 2327.00 60.88 4.76 90.09 SNHG16-201 lncRNA temporal lobe (Tissue)