ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 3.00 100.00 0.01 100.0 MIR196A1-201 miRNA temporal lobe (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 417.00 3.83 0.85 100.0 MT-RNR1-201 Mt rRNA temporal lobe (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 305.00 2.80 0.62 100.0 MT-RNR1-201 Mt rRNA temporal lobe (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 8899.00 81.71 18.21 100.0 MIR454-201 miRNA temporal lobe (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 54.00 42.52 0.11 100.0 MIR501-201 miRNA temporal lobe (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 13121.00 92.05 26.86 100.0 MIR769-201 miRNA temporal lobe (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 91.00 63.19 0.19 100.0 KRTAP19-1-201 protein coding temporal lobe (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 5243.00 29.97 10.73 100.0 MIR708-201 miRNA temporal lobe (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 25.00 89.29 0.05 100.0 MIR509-3-201 miRNA temporal lobe (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 216.00 43.20 0.44 100.0 MIR543-201 miRNA temporal lobe (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 668.00 94.08 1.37 100.0 MIR301B-201 miRNA temporal lobe (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 9691.00 62.12 19.83 84.77 RNU1-82P-201 snRNA temporal lobe (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 51.00 0.24 0.10 100.0 SNORD66-201 snoRNA temporal lobe (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 2864.00 13.57 5.86 72.23 SNORD66-201 snoRNA temporal lobe (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 9504.00 45.02 19.45 100.0 SNORD66-201 snoRNA temporal lobe (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 744.00 3.52 1.52 100.0 SNORD66-201 snoRNA temporal lobe (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 1030.00 74.26 2.11 100.0 U3.17-201 snoRNA temporal lobe (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 2546.00 35.40 5.21 100.0 SNORD17-201 snoRNA temporal lobe (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 67.00 22.11 0.14 100.0 SNORD72-201 snoRNA temporal lobe (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 2361.00 70.90 4.83 100.0 SNORD70B-201 snoRNA temporal lobe (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 15186.00 48.89 31.08 95.07 RNY4P18-201 misc RNA temporal lobe (Tissue)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 151751.00 93.11 310.60 100.0 SNORD90-201 snoRNA temporal lobe (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 1730.00 1.06 3.54 17.79 SNORD90-201 snoRNA temporal lobe (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 1790.00 0.88 3.66 100.0 SNORD69-201 snoRNA temporal lobe (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 2062.00 1.02 4.22 100.0 SNORD69-201 snoRNA temporal lobe (Tissue)