ENCFF001RMB

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 41.00 0.70 0.13 100.0 ENST00000554988 lncRNA skeletal muscle tissue (Tissue)
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 781.00 13.38 2.52 100.0 ENST00000554988 lncRNA skeletal muscle tissue (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 235.00 0.48 0.76 100.0 SNHG14-220 retained intron skeletal muscle tissue (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 391.00 0.81 1.26 100.0 SNHG14-220 retained intron skeletal muscle tissue (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 23444.00 48.38 75.67 100.0 SNHG14-220 retained intron skeletal muscle tissue (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 21700.00 44.78 70.04 100.0 SNHG14-220 retained intron skeletal muscle tissue (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 6893.00 99.39 22.25 100.0 TEKT4P2-201 transcribed unprocessed pseudogene skeletal muscle tissue (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 21.00 0.02 0.07 100.0 RPL4-202 retained intron skeletal muscle tissue (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 640.00 0.57 2.07 100.0 RPL4-202 retained intron skeletal muscle tissue (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 219.00 0.19 0.71 100.0 RPL4-202 retained intron skeletal muscle tissue (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 364.00 0.32 1.17 100.0 RPL4-202 retained intron skeletal muscle tissue (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 105050.00 92.89 339.06 98.54 RPL4-202 retained intron skeletal muscle tissue (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 22.00 0.06 0.07 100.0 ENST00000563103 lncRNA skeletal muscle tissue (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 4505.00 68.50 14.54 100.0 RPL4-207 retained intron skeletal muscle tissue (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 47.00 0.71 0.15 100.0 RPL4-207 retained intron skeletal muscle tissue (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 37067.00 78.69 119.64 95.41 ENST00000565336 lncRNA skeletal muscle tissue (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 2675.00 5.68 8.63 65.56 ENST00000565336 lncRNA skeletal muscle tissue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 209333.00 81.49 675.64 85.04 RBMX-210 retained intron skeletal muscle tissue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 1028.00 0.40 3.32 100.0 RBMX-210 retained intron skeletal muscle tissue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 307.00 0.12 0.99 100.0 RBMX-210 retained intron skeletal muscle tissue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 1645.00 0.64 5.31 100.0 RBMX-210 retained intron skeletal muscle tissue (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 3665.00 48.73 11.83 100.0 RPL4-214 retained intron skeletal muscle tissue (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 1489.00 19.80 4.81 100.0 RPL4-214 retained intron skeletal muscle tissue (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 14760.94 31.64 47.64 50.45 POLG-DT-202 lncRNA skeletal muscle tissue (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 15835.03 33.94 51.11 50.58 POLG-DT-202 lncRNA skeletal muscle tissue (Tissue)