ENCFF001RMB

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 1109.00 2.38 3.58 100.0 POLG-DT-202 lncRNA skeletal muscle tissue (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 24593.00 72.80 79.38 100.0 ENST00000570843 lncRNA skeletal muscle tissue (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 2178.00 61.77 7.03 100.0 MIR497HG-207 lncRNA skeletal muscle tissue (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 635625.00 99.63 2051.52 99.89 MIR22HG-212 lncRNA skeletal muscle tissue (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 192.00 0.41 0.62 59.81 SNORD53B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 43440.00 91.88 140.21 94.11 SNORD53B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 129.00 0.27 0.42 40.19 SNORD53B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 1972.00 85.81 6.36 100.0 ENST00000578036 lncRNA skeletal muscle tissue (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 4066.00 88.95 13.12 100.0 RPL23A-207 protein coding skeletal muscle tissue (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 1348.00 86.52 4.35 100.0 MIR744-201 miRNA skeletal muscle tissue (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 9065.00 78.05 29.26 100.0 MIR378C-201 miRNA skeletal muscle tissue (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 9600.00 61.35 30.98 88.02 MIR142HG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 390.00 2.49 1.26 100.0 MIR142HG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 3414.00 21.82 11.02 61.86 MIR142HG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 235.00 2.51 0.76 100.0 SNORD3C-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 63.69 0.07 0.21 51.78 RPL23A-208 retained intron skeletal muscle tissue (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 70853.00 79.39 228.68 89.9 RPL23A-208 retained intron skeletal muscle tissue (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 16846.00 18.88 54.37 91.19 RPL23A-208 retained intron skeletal muscle tissue (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 97.27 0.11 0.31 60.42 RPL23A-208 retained intron skeletal muscle tissue (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 6182.00 0.72 19.95 100.0 MIR133A1HG-202 lncRNA skeletal muscle tissue (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 4705.00 2.99 15.19 48.47 RPL17-211 retained intron skeletal muscle tissue (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 20009.00 12.71 64.58 37.83 RPL17-211 retained intron skeletal muscle tissue (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 259.00 0.16 0.84 100.0 RPL17-211 retained intron skeletal muscle tissue (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 104299.00 66.27 336.63 94.9 RPL17-211 retained intron skeletal muscle tissue (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 22661.00 14.40 73.14 95.98 RPL17-211 retained intron skeletal muscle tissue (Tissue)