ENCFF001RMB

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 9764.00 4.15 31.51 85.36 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 15252.00 6.49 49.23 100.0 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 479.00 77.26 1.55 84.04 MIR3142HG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 3535.00 80.56 11.41 100.0 SNHG6-204 retained intron skeletal muscle tissue (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 27255.00 36.96 87.97 100.0 MIR151A-201 miRNA skeletal muscle tissue (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 37315.00 50.60 120.44 84.18 MIR151A-201 miRNA skeletal muscle tissue (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 1521.00 92.13 4.91 100.0 DENND3-221 protein coding skeletal muscle tissue (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 9.00 0.00 0.03 100.0 WDR74-204 protein coding skeletal muscle tissue (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 13.00 0.01 0.04 76.47 WDR74-204 protein coding skeletal muscle tissue (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 980.00 0.48 3.16 76.62 WDR74-204 protein coding skeletal muscle tissue (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 4.00 0.00 0.01 23.53 WDR74-204 protein coding skeletal muscle tissue (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 40.00 0.02 0.13 80.0 WDR74-204 protein coding skeletal muscle tissue (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 241.00 0.12 0.78 100.0 WDR74-204 protein coding skeletal muscle tissue (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 734.00 0.36 2.37 100.0 WDR74-204 protein coding skeletal muscle tissue (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 27.00 0.01 0.09 100.0 WDR74-204 protein coding skeletal muscle tissue (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 4900.00 75.79 15.82 100.0 HSPA8-211 retained intron skeletal muscle tissue (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 399.00 14.29 1.29 100.0 SCARNA9-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 63153.00 94.75 203.83 100.0 TAF1D-215 retained intron skeletal muscle tissue (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 319.00 0.48 1.03 100.0 TAF1D-215 retained intron skeletal muscle tissue (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 830.00 10.80 2.68 100.0 HSPA8-215 retained intron skeletal muscle tissue (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 4615.00 60.05 14.90 100.0 HSPA8-215 retained intron skeletal muscle tissue (Tissue)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 24.00 0.31 0.08 100.0 HSPA8-215 retained intron skeletal muscle tissue (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 1390.00 39.27 4.49 100.0 RPS2-215 retained intron skeletal muscle tissue (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 165406.00 84.39 533.86 85.58 ENST00000548801 lncRNA skeletal muscle tissue (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 41.00 0.70 0.13 100.0 ENST00000554988 lncRNA skeletal muscle tissue (Tissue)