ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 45.00 0.03 0.11 100.0 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 562.00 0.32 1.38 100.0 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 86710.38 49.27 213.61 67.14 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 20012.00 11.37 49.30 86.9 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 43.00 0.02 0.11 100.0 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 2856.00 1.62 7.04 100.0 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 36.00 0.02 0.09 100.0 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 4424.00 2.51 10.90 98.11 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 635.00 11.09 1.56 69.63 SNHG14-323 lncRNA skin of body (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 1244079.00 96.02 3064.75 99.39 MEG8-251 lncRNA skin of body (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 4341.00 0.34 10.69 65.02 MEG8-251 lncRNA skin of body (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 3224.00 0.25 7.94 49.98 MEG8-251 lncRNA skin of body (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 10498.00 0.81 25.86 92.88 MEG8-251 lncRNA skin of body (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 4433.00 0.34 10.92 100.0 MEG8-251 lncRNA skin of body (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 9109.00 56.02 22.44 87.49 SNHG14-336 lncRNA skin of body (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 6367.00 39.16 15.68 60.24 SNHG14-336 lncRNA skin of body (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 3494.00 62.18 8.61 94.36 SNHG14-341 lncRNA skin of body (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 114.00 4.50 0.28 100.0 NCL-211 retained intron skin of body (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 290.00 15.47 0.71 100.0 FMN2-209 protein coding CDS not defined skin of body (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 11.00 0.05 0.03 100.0 LINC02739-203 lncRNA skin of body (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 29.00 0.12 0.07 8.68 LINC02739-203 lncRNA skin of body (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 7769.00 32.48 19.14 100.0 LINC02739-203 lncRNA skin of body (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 2754.00 11.51 6.78 100.0 LINC02739-203 lncRNA skin of body (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 1361.00 5.69 3.35 100.0 LINC02739-203 lncRNA skin of body (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 305.00 1.27 0.75 91.32 LINC02739-203 lncRNA skin of body (Tissue)