ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 7273.00 0.36 17.92 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 473.00 0.02 1.17 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 581.00 0.03 1.43 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 21339.00 1.06 52.57 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 180.00 0.01 0.44 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 3443.00 0.17 8.48 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 56930.00 2.81 140.25 70.22 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 2615.00 0.13 6.44 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 264494.00 13.08 651.57 97.5 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 5876.00 0.29 14.48 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 1200.00 0.06 2.96 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 4.00 0.00 0.01 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 118600.00 5.86 292.17 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 4397.00 0.22 10.83 79.5 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 1250.48 0.06 3.08 57.55 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 661.00 0.03 1.63 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 4826.00 0.24 11.89 67.77 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1833.00 0.09 4.52 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 3859.00 0.19 9.51 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 1870.00 0.09 4.61 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 42366.00 42.77 104.37 100.0 SNHG14-315 lncRNA skin of body (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 20059.00 20.25 49.41 91.31 SNHG14-315 lncRNA skin of body (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 24299.00 24.53 59.86 86.26 SNHG14-315 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 1321.00 0.75 3.25 100.0 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 41693.59 23.69 102.71 35.39 SNHG5-273 lncRNA skin of body (Tissue)