ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 11.00 4.07 0.03 100.0 SNHG14-306 lncRNA skin of body (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 158.00 58.52 0.39 97.53 SNHG14-306 lncRNA skin of body (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 16.00 5.93 0.04 100.0 SNHG14-306 lncRNA skin of body (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 180.00 0.98 0.44 100.0 ENST00000666735 lncRNA skin of body (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 7037.00 38.27 17.34 100.0 ENST00000666735 lncRNA skin of body (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 23310.00 87.14 57.42 100.0 MEG8-242 lncRNA skin of body (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 3153.09 26.09 7.77 35.73 SNHG14-312 lncRNA skin of body (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 5693.50 47.11 14.03 64.52 SNHG14-312 lncRNA skin of body (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 607.00 5.02 1.50 100.0 SNHG14-312 lncRNA skin of body (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 1342.00 0.43 3.31 100.0 MEG8-244 lncRNA skin of body (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 3386.00 1.08 8.34 100.0 MEG8-244 lncRNA skin of body (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 301020.00 96.36 741.55 99.95 MEG8-244 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 1906.00 0.09 4.70 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 2.00 0.00 0.00 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 7763.00 0.38 19.12 99.27 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 889.47 0.04 2.19 40.93 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 3811.00 0.19 9.39 79.64 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 1108797.00 54.82 2731.49 98.69 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 1431.00 0.07 3.53 70.6 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 178159.00 8.81 438.89 99.55 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 9643.00 0.48 23.76 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 35844.00 1.77 88.30 97.68 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 388.00 0.02 0.96 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 1537.00 0.08 3.79 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 1745.00 0.09 4.30 100.0 SNHG1-248 lncRNA skin of body (Tissue)