ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 646.00 8.68 1.59 100.0 HSPA9-211 retained intron skin of body (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 1002.00 13.46 2.47 33.48 HSPA9-211 retained intron skin of body (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 354336.00 90.65 872.90 100.0 DNM3OS-205 lncRNA skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 107.00 0.01 0.26 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 6014.00 0.37 14.82 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 2715.00 0.17 6.69 69.62 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 24274.00 1.49 59.80 95.8 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 80.00 0.00 0.20 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 223.00 0.01 0.55 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 654.00 0.04 1.61 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 1181411.00 72.59 2910.37 99.78 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 2057.00 0.13 5.07 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 6394.00 0.39 15.75 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1191.00 0.07 2.93 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 678.00 0.04 1.67 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 3287.00 0.20 8.10 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 1966.00 0.12 4.84 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 782.00 0.05 1.93 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 912.00 0.06 2.25 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 14439.00 0.89 35.57 85.06 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 14258.00 0.88 35.12 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 48303.00 2.97 118.99 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 64617.00 3.97 159.18 97.42 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 163118.00 10.02 401.84 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 1214.00 0.07 2.99 100.0 GAS5-230 retained intron skin of body (Tissue)