ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 2533.00 0.81 6.24 56.18 ENST00000619323 lncRNA skin of body (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 304697.00 97.32 750.61 98.97 ENST00000619323 lncRNA skin of body (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 214.00 14.15 0.53 100.0 SCARNA4-202 scaRNA skin of body (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 760.00 73.36 1.87 100.0 ENST00000625572 miRNA skin of body (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 24268.00 92.64 59.78 100.0 ENST00000628177 snoRNA skin of body (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 5805.00 93.61 14.30 100.0 ENST00000630615 snoRNA skin of body (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 106.00 25.24 0.26 100.0 DMRT2-209 protein coding skin of body (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 107.00 25.48 0.26 100.0 DMRT2-209 protein coding skin of body (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 975.00 12.94 2.40 100.0 SNORD98-201 snoRNA skin of body (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 4975.00 66.01 12.26 100.0 SNORD98-201 snoRNA skin of body (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 124517.24 41.30 306.74 44.32 MIR106AHG-201 lncRNA skin of body (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 231.09 0.08 0.57 19.04 MIR106AHG-201 lncRNA skin of body (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 177.00 0.06 0.44 100.0 MIR106AHG-201 lncRNA skin of body (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 902.26 0.30 2.22 74.32 MIR106AHG-201 lncRNA skin of body (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 870.00 7.59 2.14 100.0 MEG8-222 lncRNA skin of body (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 5375.00 46.87 13.24 100.0 MEG8-222 lncRNA skin of body (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 5150.00 12.65 12.69 93.98 SNHG14-224 lncRNA skin of body (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 15348.00 37.69 37.81 91.05 SNHG14-224 lncRNA skin of body (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 3325.00 8.17 8.19 100.0 SNHG14-224 lncRNA skin of body (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 3146.00 7.73 7.75 90.07 SNHG14-224 lncRNA skin of body (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 132.00 0.32 0.33 100.0 SNHG14-224 lncRNA skin of body (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 1618.00 3.97 3.99 48.26 SNHG14-224 lncRNA skin of body (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 1524.00 3.74 3.75 71.42 SNHG14-224 lncRNA skin of body (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 1320.00 3.24 3.25 59.7 SNHG14-224 lncRNA skin of body (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 877.62 22.54 2.16 73.44 5S_rRNA.20-201 rRNA pseudogene skin of body (Tissue)