ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 26951.00 72.84 66.39 100.0 GNL3-211 retained intron skin of body (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 4864.00 68.18 11.98 100.0 RPL5-205 retained intron skin of body (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 489.00 6.85 1.20 100.0 RPL5-205 retained intron skin of body (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 117.00 3.07 0.29 100.0 ZBED9-AS1-201 lncRNA skin of body (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 24869.00 89.92 61.26 100.0 RPS3A-206 retained intron skin of body (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 19840.00 92.18 48.88 100.0 COX7C-203 protein coding skin of body (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 4204.00 1.82 10.36 83.83 RACK1-229 protein coding skin of body (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 739.00 0.32 1.82 100.0 RACK1-229 protein coding skin of body (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 172350.28 74.49 424.58 80.61 RACK1-229 protein coding skin of body (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 45342.68 19.60 111.70 28.7 RACK1-229 protein coding skin of body (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 34302.00 20.55 84.50 68.69 RACK1-230 retained intron skin of body (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 129081.00 77.35 317.99 96.6 RACK1-230 retained intron skin of body (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 3.00 3.66 0.01 100.0 RNA5SP486-201 rRNA pseudogene skin of body (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 833.00 79.48 2.05 100.0 SCARNA5-201 scaRNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 2151.00 1.12 5.30 100.0 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 484.00 0.25 1.19 100.0 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 132646.00 69.00 326.77 98.27 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 4464.00 2.32 11.00 97.3 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 156.00 0.08 0.38 100.0 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1331.00 0.69 3.28 33.63 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 5613.00 2.92 13.83 65.86 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 611.00 0.32 1.51 100.0 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 7349.00 3.82 18.10 75.86 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 405.00 0.21 1.00 100.0 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 100.00 0.05 0.25 51.02 RNY4-201 misc RNA skin of body (Tissue)