ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000484610.5 ENST00000484610.5_392_433_+ 392–433 1418.00 1.80 3.49 100.0 RPL13-207 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 3970.00 0.36 9.78 50.08 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 8574.00 0.77 21.12 72.05 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 1069.00 0.10 2.63 29.99 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 1254.00 0.11 3.09 45.92 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_343_434_+ 343–434 7.00 0.00 0.02 100.0 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 4366.00 0.39 10.76 78.44 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 66.00 0.01 0.16 60.0 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 8868.00 0.79 21.85 86.02 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 99252.00 8.88 244.50 65.1 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 829.00 0.07 2.04 100.0 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 956802.00 85.63 2357.05 99.05 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 4549.00 0.41 11.21 100.0 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 897.00 0.08 2.21 56.1 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 399.00 0.04 0.98 100.0 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 278.00 0.02 0.68 100.0 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 86441.00 95.85 212.94 100.0 RPS8-207 protein coding CDS not defined skin of body (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 288.00 11.00 0.71 100.0 RPL7A-206 protein coding CDS not defined skin of body (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 699.00 26.70 1.72 100.0 RPL7A-206 protein coding CDS not defined skin of body (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 482.00 18.41 1.19 100.0 RPL7A-206 protein coding CDS not defined skin of body (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 784804.00 83.47 1933.34 99.28 RPL21-209 retained intron skin of body (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 3744.00 0.40 9.22 100.0 RPL21-209 retained intron skin of body (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 2606.00 0.28 6.42 100.0 RPL21-209 retained intron skin of body (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 1218.00 0.13 3.00 100.0 RPL21-209 retained intron skin of body (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 137035.00 14.57 337.58 99.45 RPL21-209 retained intron skin of body (Tissue)