ENCFF001RLZ

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 233743.00 55.57 220.81 95.82 RPL17-211 retained intron heart (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 129639.00 30.82 122.47 97.63 RPL17-211 retained intron heart (Tissue)
ENST00000582320.4 ENST00000582320.4_575_600_+ 575–600 2254.00 8.31 2.13 100.0 ENST00000582320 lncRNA heart (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 15173.00 55.95 14.33 78.2 ENST00000582320 lncRNA heart (Tissue)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 4095.00 15.10 3.87 100.0 ENST00000582320 lncRNA heart (Tissue)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 2072.00 1.91 1.96 100.0 RPL17-214 retained intron heart (Tissue)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 59937.99 55.32 56.62 60.22 RPL17-214 retained intron heart (Tissue)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 41606.07 38.40 39.30 46.06 RPL17-214 retained intron heart (Tissue)
ENST00000583861.1 ENST00000583861.1_27_62_+ 27–62 561.00 0.06 0.53 100.0 SNORD43-201 snoRNA heart (Tissue)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 885150.00 99.08 836.19 99.91 SNORD43-201 snoRNA heart (Tissue)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 616.00 0.07 0.58 100.0 SNORD43-201 snoRNA heart (Tissue)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 1911.00 58.14 1.81 100.0 MIR151B-201 miRNA heart (Tissue)
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 149.00 0.78 0.14 100.0 SNORD3A-201 snoRNA heart (Tissue)
ENST00000585078.1 ENST00000585078.1_1_83_+ 1–83 9126.00 74.33 8.62 100.0 SNORD92-201 snoRNA heart (Tissue)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 34787.00 81.20 32.86 100.0 NSRP1-214 protein coding heart (Tissue)
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 4224.00 9.86 3.99 79.79 NSRP1-214 protein coding heart (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 6346.00 9.99 5.99 72.64 MIR23AHG-201 lncRNA heart (Tissue)
ENST00000587762.2 ENST00000587762.2_6337_6420_+ 6337–6420 2203.00 3.47 2.08 100.0 MIR23AHG-201 lncRNA heart (Tissue)
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 16236.00 25.56 15.34 93.07 MIR23AHG-201 lncRNA heart (Tissue)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 18845.00 29.66 17.80 90.96 MIR23AHG-201 lncRNA heart (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 10982.00 17.29 10.37 89.99 MIR23AHG-201 lncRNA heart (Tissue)
ENST00000590797.5 ENST00000590797.5_2254_2275_+ 2254–2275 31.00 18.24 0.03 100.0 MIR122HG-201 lncRNA heart (Tissue)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 50.00 43.86 0.05 100.0 ODAD3-204 nonsense mediated decay heart (Tissue)
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 3543.00 2.07 3.35 100.0 VMP1-217 retained intron heart (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3402_+ 3343–3402 87.00 0.05 0.08 100.0 VMP1-217 retained intron heart (Tissue)