ENCFF001RLZ

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 98988.00 57.80 93.51 62.2 VMP1-217 retained intron heart (Tissue)
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 1586.00 0.07 1.50 100.0 C19orf48P-203 retained intron heart (Tissue)
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 1549318.60 73.26 1463.62 81.38 C19orf48P-203 retained intron heart (Tissue)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 573920.98 27.14 542.18 28.07 C19orf48P-203 retained intron heart (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 40583.00 1.92 38.34 93.25 C19orf48P-203 retained intron heart (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 296.00 0.01 0.28 100.0 C19orf48P-203 retained intron heart (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 22.00 0.00 0.02 100.0 C19orf48P-203 retained intron heart (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 1489.00 84.70 1.41 100.0 ENST00000597420 lncRNA heart (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 161.00 3.39 0.15 100.0 RPS11-206 retained intron heart (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 3622.00 76.33 3.42 100.0 RPS11-206 retained intron heart (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 481955.00 40.65 455.30 43.04 CARMN-209 lncRNA heart (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 2595.00 38.33 2.45 100.0 ENST00000602478 lncRNA heart (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 28.00 15.73 0.03 100.0 PPFIA1P1-201 processed pseudogene heart (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 5676.00 56.87 5.36 100.0 SNORD114-21-201 snoRNA heart (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 2539.00 25.44 2.40 100.0 SNORD114-21-201 snoRNA heart (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 3377.00 43.99 3.19 100.0 SNORD115-40-201 snoRNA heart (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 20817.00 98.73 19.67 100.0 MIR98-201 miRNA heart (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 22131.00 95.49 20.91 100.0 SNORD113-5-201 snoRNA heart (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 9782.00 93.01 9.24 100.0 MIR15A-201 miRNA heart (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 963.00 84.55 0.91 100.0 MIR376C-201 miRNA heart (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 1753.00 64.19 1.66 100.0 SNHG21-206 retained intron heart (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 101.00 14.21 0.10 100.0 SNORD11B-201 snoRNA heart (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 2418.00 58.83 2.28 100.0 SNORD91B-201 snoRNA heart (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 11874.00 51.80 11.22 75.02 SNORD91A-201 snoRNA heart (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 97481.00 47.10 92.09 97.26 MIR486-1-201 miRNA heart (Tissue)