ENCFF001RLZ

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 7357.06 27.19 6.95 38.2 POLG-DT-202 lncRNA heart (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 12714.28 47.00 12.01 65.22 POLG-DT-202 lncRNA heart (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 415.00 1.53 0.39 100.0 POLG-DT-202 lncRNA heart (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 6733.00 49.39 6.36 100.0 ENST00000570843 lncRNA heart (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 2939.00 61.68 2.78 100.0 MIR497HG-207 lncRNA heart (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 903237.00 99.37 853.28 99.75 MIR22HG-212 lncRNA heart (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 947.00 1.32 0.89 58.1 SNORD53B-201 snoRNA heart (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 64419.00 90.04 60.86 93.62 SNORD53B-201 snoRNA heart (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 683.00 0.95 0.65 41.9 SNORD53B-201 snoRNA heart (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 2216.00 97.45 2.09 100.0 ENST00000578036 lncRNA heart (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 7827.00 89.48 7.39 100.0 RPL23A-207 protein coding heart (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 2819.00 85.17 2.66 100.0 MIR744-201 miRNA heart (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 6965.00 74.72 6.58 100.0 MIR378C-201 miRNA heart (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 62.00 0.58 0.06 100.0 MIR142HG-201 lncRNA heart (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 7243.00 67.63 6.84 79.46 MIR142HG-201 lncRNA heart (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 980.00 9.15 0.93 26.22 MIR142HG-201 lncRNA heart (Tissue)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 1590.00 9.75 1.50 100.0 SNORD3C-201 snoRNA heart (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 441.33 0.09 0.42 49.59 RPL23A-208 retained intron heart (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 960.23 0.20 0.91 66.87 RPL23A-208 retained intron heart (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 141135.00 29.54 133.33 90.39 RPL23A-208 retained intron heart (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 330504.00 69.18 312.22 82.05 RPL23A-208 retained intron heart (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 22987.00 1.56 21.72 100.0 MIR133A1HG-202 lncRNA heart (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 10117.00 2.41 9.56 32.43 RPL17-211 retained intron heart (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 31371.00 7.46 29.64 39.33 RPL17-211 retained intron heart (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 2277.00 0.54 2.15 100.0 RPL17-211 retained intron heart (Tissue)