ENCFF001RLZ

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 123121.00 83.72 116.31 84.53 ENST00000548801 lncRNA heart (Tissue)
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 2568.00 20.56 2.43 100.0 ENST00000554988 lncRNA heart (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 3304.00 26.46 3.12 100.0 ENST00000554988 lncRNA heart (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 17.00 0.14 0.02 100.0 ENST00000554988 lncRNA heart (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 3276.00 1.44 3.09 100.0 SNHG14-220 retained intron heart (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 90050.00 39.68 85.07 100.0 SNHG14-220 retained intron heart (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 119831.00 52.80 113.20 100.0 SNHG14-220 retained intron heart (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 2806.00 1.24 2.65 100.0 SNHG14-220 retained intron heart (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 1733.00 99.48 1.64 100.0 TEKT4P2-201 transcribed unprocessed pseudogene heart (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 519.00 0.07 0.49 100.0 RPL4-202 retained intron heart (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 23.00 0.00 0.02 100.0 RPL4-202 retained intron heart (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 1239.00 0.17 1.17 100.0 RPL4-202 retained intron heart (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 907.00 0.13 0.86 100.0 RPL4-202 retained intron heart (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 706153.00 97.57 667.09 99.44 RPL4-202 retained intron heart (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 31.00 0.25 0.03 100.0 ENST00000563103 lncRNA heart (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 9499.00 71.60 8.97 100.0 RPL4-207 retained intron heart (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 182.00 1.37 0.17 100.0 RPL4-207 retained intron heart (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 3009.00 9.39 2.84 72.93 ENST00000565336 lncRNA heart (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 24450.00 76.29 23.10 93.95 ENST00000565336 lncRNA heart (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 752664.00 90.22 711.03 94.1 RBMX-210 retained intron heart (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 4786.00 0.57 4.52 100.0 RBMX-210 retained intron heart (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 2135.00 0.26 2.02 100.0 RBMX-210 retained intron heart (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 8474.00 1.02 8.01 100.0 RBMX-210 retained intron heart (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 7756.00 65.00 7.33 100.0 RPL4-214 retained intron heart (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 1482.00 12.42 1.40 100.0 RPL4-214 retained intron heart (Tissue)