ENCFF001RLZ

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 4672.00 1.42 4.41 100.0 RABGGTB-213 protein coding CDS not defined heart (Tissue)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 16324.00 64.49 15.42 100.0 GNL3-211 retained intron heart (Tissue)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 5855.00 23.13 5.53 100.0 GNL3-211 retained intron heart (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 5927.00 56.96 5.60 100.0 RPL5-205 retained intron heart (Tissue)
ENST00000497519.1 ENST00000497519.1_675_769_+ 675–769 2.00 0.02 0.00 100.0 RPL5-205 retained intron heart (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 2605.00 25.04 2.46 100.0 RPL5-205 retained intron heart (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 125.00 4.34 0.12 100.0 ZBED9-AS1-201 lncRNA heart (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 25449.00 88.62 24.04 100.0 RPS3A-206 retained intron heart (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 116910.00 96.79 110.44 100.0 COX7C-203 protein coding heart (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 924.00 0.21 0.87 100.0 RACK1-229 protein coding heart (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 245065.44 56.35 231.51 59.77 RACK1-229 protein coding heart (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 6421.00 1.48 6.07 77.8 RACK1-229 protein coding heart (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 162899.01 37.46 153.89 44.83 RACK1-229 protein coding heart (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 272621.00 48.41 257.54 86.57 RACK1-230 retained intron heart (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 281240.00 49.94 265.68 76.27 RACK1-230 retained intron heart (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 21.00 4.92 0.02 100.0 RNA5SP486-201 rRNA pseudogene heart (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 1984.00 83.26 1.87 100.0 SCARNA5-201 scaRNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 16920.00 8.23 15.98 91.85 RNY4-201 misc RNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 87.00 0.04 0.08 100.0 RNY4-201 misc RNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 2240.00 1.09 2.12 64.55 RNY4-201 misc RNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 28049.00 13.64 26.50 84.3 RNY4-201 misc RNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 4496.00 2.19 4.25 100.0 RNY4-201 misc RNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 5213.00 2.53 4.92 74.82 RNY4-201 misc RNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 980.00 0.48 0.93 100.0 RNY4-201 misc RNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 853.00 0.41 0.81 36.52 RNY4-201 misc RNA heart (Tissue)