ENCFF001RLZ

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000484610.5 ENST00000484610.5_361_433_+ 361–433 130526.00 93.60 123.31 99.72 RPL13-207 retained intron heart (Tissue)
ENST00000484610.5 ENST00000484610.5_392_433_+ 392–433 3986.00 2.86 3.77 100.0 RPL13-207 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 3941.00 0.33 3.72 87.29 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 288.00 0.02 0.27 100.0 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 9038.00 0.77 8.54 52.54 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 2544.00 0.22 2.40 65.21 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 289.00 0.02 0.27 60.21 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 1258.00 0.11 1.19 41.95 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 15940.00 1.35 15.06 84.38 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 109200.00 9.25 103.16 58.84 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 1040.00 0.09 0.98 100.0 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 958371.00 81.21 905.36 98.98 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 10830.00 0.92 10.23 100.0 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 3950.00 0.33 3.73 52.33 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_343_434_+ 343–434 33.00 0.00 0.03 100.0 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 25325.00 2.15 23.92 76.45 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 2209.00 0.19 2.09 100.0 EIF4A2-219 retained intron heart (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 52618.00 96.82 49.71 100.0 RPS8-207 protein coding CDS not defined heart (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 529.00 9.39 0.50 100.0 RPL7A-206 protein coding CDS not defined heart (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 489.00 8.68 0.46 100.0 RPL7A-206 protein coding CDS not defined heart (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 2285.00 40.58 2.16 100.0 RPL7A-206 protein coding CDS not defined heart (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 1667.00 0.12 1.57 100.0 RPL21-209 retained intron heart (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 4229.00 0.30 4.00 100.0 RPL21-209 retained intron heart (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 2635.00 0.19 2.49 100.0 RPL21-209 retained intron heart (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 195878.00 13.99 185.04 99.32 RPL21-209 retained intron heart (Tissue)