ENCFF001RLZ

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 1350.00 24.52 1.28 68.63 TMEM107-204 protein coding heart (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 3.00 0.05 0.00 100.0 TMEM107-204 protein coding heart (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 146.00 2.65 0.14 100.0 TMEM107-204 protein coding heart (Tissue)
ENST00000448136.6 ENST00000448136.6_1026_1098_+ 1026–1098 1069.00 28.18 1.01 100.0 SNHG16-201 lncRNA heart (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 2012.00 53.05 1.90 88.83 SNHG16-201 lncRNA heart (Tissue)
ENST00000453082.5 ENST00000453082.5_267_347_+ 267–347 2444.00 35.87 2.31 100.0 SNHG14-207 lncRNA heart (Tissue)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 313592.00 95.44 296.25 98.27 SNORD105B-201 snoRNA heart (Tissue)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 4622.00 46.75 4.37 60.35 SNORD121B-201 snoRNA heart (Tissue)
ENST00000458892.1 ENST00000458892.1_5_39_+ 5–39 201.00 0.08 0.19 100.0 SNORD127-201 snoRNA heart (Tissue)
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 235214.00 95.95 222.20 99.54 SNORD127-201 snoRNA heart (Tissue)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 58934.00 93.69 55.67 100.0 SNORD42B-201 snoRNA heart (Tissue)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 424.00 1.97 0.40 100.0 RNY4P25-201 misc RNA heart (Tissue)
ENST00000459386.1 ENST00000459386.1_9_73_+ 9–73 3897.00 66.64 3.68 100.0 SNORD121A-201 snoRNA heart (Tissue)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 43964.00 68.57 41.53 86.87 SNORD126-201 snoRNA heart (Tissue)
ENST00000459475.1 ENST00000459475.1_4_75_+ 4–75 17338.00 27.04 16.38 63.82 SNORD126-201 snoRNA heart (Tissue)
ENST00000459577.1 ENST00000459577.1_12_91_+ 12–91 33341.00 89.79 31.50 94.03 SNORD124-201 snoRNA heart (Tissue)
ENST00000461448.6 ENST00000461448.6_522_587_+ 522–587 24.00 1.07 0.02 100.0 SNHG12-201 retained intron heart (Tissue)
ENST00000467105.1 ENST00000467105.1_581_668_+ 581–668 11508.00 48.85 10.87 94.08 RPL3-212 retained intron heart (Tissue)
ENST00000467105.1 ENST00000467105.1_582_665_+ 582–665 5993.00 25.44 5.66 100.0 RPL3-212 retained intron heart (Tissue)
ENST00000469129.1 ENST00000469129.1_822_842_+ 822–842 125373.00 97.96 118.44 100.0 SMC1A-204 retained intron heart (Tissue)
ENST00000471759.5 ENST00000471759.5_372_449_+ 372–449 42087.00 85.12 39.76 98.17 RABGGTB-208 protein coding CDS not defined heart (Tissue)
ENST00000481456.1 ENST00000481456.1_825_898_+ 825–898 9314.00 31.04 8.80 81.4 DDX39B-219 retained intron heart (Tissue)
ENST00000481456.1 ENST00000481456.1_847_901_+ 847–901 2684.00 8.95 2.54 100.0 DDX39B-219 retained intron heart (Tissue)
ENST00000481456.1 ENST00000481456.1_862_898_+ 862–898 8812.00 29.37 8.32 100.0 DDX39B-219 retained intron heart (Tissue)
ENST00000484599.1 ENST00000484599.1_580_645_+ 580–645 7084.00 71.66 6.69 100.0 RPS8-206 protein coding CDS not defined heart (Tissue)