ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 272.00 0.10 0.78 66.5 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 123.00 0.05 0.35 56.42 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 1049.00 15.25 2.99 39.24 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 1103.00 97.01 3.15 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 644.00 7.81 1.84 98.92 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 863.00 92.10 2.46 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 190.00 0.70 0.54 82.25 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 41.00 0.15 0.12 17.75 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 15344.00 56.47 43.77 82.61 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 10287.06 36.68 29.35 46.85 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 285.00 1.02 0.81 75.8 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 13272.13 47.32 37.86 60.89 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 27449.00 92.21 78.31 97.37 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 104.00 6.15 0.30 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 1563.00 30.98 4.46 74.25 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 251.00 0.03 0.72 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 465.00 0.19 1.33 64.32 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 528.00 60.48 1.51 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 621.00 31.54 1.77 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 924346.00 97.57 2637.07 99.7 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 71.00 0.27 0.20 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 11635.00 44.93 33.19 83.99 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 5943.00 79.47 16.95 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 1587.00 65.58 4.53 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 384.00 26.65 1.10 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA diencephalon (Tissue)