ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 247.00 0.33 0.70 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 62.00 1.38 0.18 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 2045.00 12.94 5.83 38.8 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 13.00 0.30 0.04 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 489.00 6.66 1.40 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 855.00 11.65 2.44 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 503.00 6.85 1.44 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 1.00 0.01 0.00 50.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 162.00 0.06 0.46 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 171.00 35.33 0.49 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 1445.00 55.41 4.12 78.75 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 17.00 0.65 0.05 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 390.00 14.95 1.11 21.25 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 1043.00 40.27 2.98 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 2.00 0.08 0.01 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 355.00 49.93 1.01 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 2364.00 87.17 6.74 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 296.00 35.79 0.84 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 31.00 0.23 0.09 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 22.00 0.17 0.06 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 25.00 0.19 0.07 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 53.00 0.40 0.15 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 186.00 1.41 0.53 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 14.00 0.11 0.04 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 3242.00 1.19 9.25 94.0 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA diencephalon (Tissue)