ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 44.00 13.97 0.13 100.0 ENST00000849527 lncRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 7274.00 80.38 20.75 97.18 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 10.00 0.11 0.03 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 971.00 0.10 2.77 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 635.00 48.55 1.81 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 350.00 26.76 1.00 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 43.00 10.24 0.12 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 237.00 11.50 0.68 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 2981.00 57.04 8.50 88.06 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 303.00 0.03 0.86 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 3836.00 50.88 10.94 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 1303.00 18.94 3.72 98.27 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 296.00 4.30 0.84 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 845.00 28.57 2.41 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 1610.00 0.64 4.59 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 600.00 0.24 1.71 84.75 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 25.00 0.01 0.07 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 121.00 0.05 0.35 73.78 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 46843.00 18.75 133.64 52.66 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 775.00 0.31 2.21 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 12.00 0.00 0.03 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 53.00 15.73 0.15 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 137.00 0.06 0.39 98.56 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 465.00 29.81 1.33 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 137.00 8.78 0.39 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA diencephalon (Tissue)