ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 1512.06 3.27 4.31 50.54 ENST00000823279 lncRNA diencephalon (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 382.00 0.82 1.09 100.0 ENST00000823279 lncRNA diencephalon (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 6665.00 14.39 19.01 99.0 ENST00000823279 lncRNA diencephalon (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 1723.39 3.72 4.92 42.73 ENST00000823279 lncRNA diencephalon (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 1806.50 3.90 5.15 39.65 ENST00000823279 lncRNA diencephalon (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 2410.00 5.20 6.88 80.09 ENST00000823279 lncRNA diencephalon (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 5149.36 11.12 14.69 51.34 ENST00000823279 lncRNA diencephalon (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 3887.47 8.40 11.09 36.6 ENST00000823801 lncRNA diencephalon (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 486.00 39.07 1.39 45.72 ENST00000827714 lncRNA diencephalon (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 577.00 46.38 1.65 54.28 ENST00000827714 lncRNA diencephalon (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 674.00 2.73 1.92 100.0 GAS5-377 lncRNA diencephalon (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 231.00 0.94 0.66 100.0 GAS5-377 lncRNA diencephalon (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 512.00 2.07 1.46 100.0 GAS5-377 lncRNA diencephalon (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 22306.00 90.30 63.64 100.0 GAS5-377 lncRNA diencephalon (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 9.00 81.82 0.03 100.0 MIR205HG-245 lncRNA diencephalon (Tissue)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 5239.00 62.66 14.95 100.0 TAF12-DT-204 lncRNA diencephalon (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 260609.00 94.74 743.49 99.69 ZFAS1-238 lncRNA diencephalon (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 1037.00 0.38 2.96 100.0 ZFAS1-238 lncRNA diencephalon (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 3827.00 1.39 10.92 100.0 ZFAS1-238 lncRNA diencephalon (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1076.00 0.39 3.07 100.0 ZFAS1-238 lncRNA diencephalon (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 5198.00 8.12 14.83 100.0 ZFAS1-242 lncRNA diencephalon (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 56373.00 88.07 160.83 100.0 ZFAS1-242 lncRNA diencephalon (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 88.00 46.32 0.25 100.0 ENST00000837997 lncRNA diencephalon (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 26.00 13.68 0.07 100.0 ENST00000837997 lncRNA diencephalon (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 5261.00 75.07 15.01 83.19 ENST00000839036 lncRNA diencephalon (Tissue)