ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 6.00 0.06 0.02 100.0 LIMD1-AS1-204 lncRNA diencephalon (Tissue)
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 3.00 0.03 0.01 100.0 LIMD1-AS1-204 lncRNA diencephalon (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 2117.00 20.94 6.04 70.78 LIMD1-AS1-204 lncRNA diencephalon (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 286984.00 74.32 818.74 93.7 MIR99AHG-262 lncRNA diencephalon (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 15189.00 3.93 43.33 100.0 MIR99AHG-262 lncRNA diencephalon (Tissue)
ENST00000660376.1 ENST00000660376.1_1_78_+ 1–78 3671.00 4.41 10.47 100.0 SNHG14-266 lncRNA diencephalon (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 1862.00 63.14 5.31 100.0 SNHG14-270 lncRNA diencephalon (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 1826.00 0.50 5.21 100.0 SNHG14-275 lncRNA diencephalon (Tissue)
ENST00000661688.1 ENST00000661688.1_965_986_+ 965–986 4863.00 1.39 13.87 100.0 MIR9-2HG-225 lncRNA diencephalon (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 306266.00 87.61 873.75 91.94 MIR9-2HG-225 lncRNA diencephalon (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 1018.00 12.12 2.90 100.0 MEG8-233 lncRNA diencephalon (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 4438.00 52.85 12.66 100.0 MEG8-233 lncRNA diencephalon (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 9928.00 5.82 28.32 100.0 SNHG14-278 lncRNA diencephalon (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 126513.00 74.14 360.93 94.47 SNHG14-278 lncRNA diencephalon (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 8169.00 61.57 23.31 100.0 MEG8-234 lncRNA diencephalon (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 467.00 3.52 1.33 100.0 MEG8-234 lncRNA diencephalon (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 959.00 74.51 2.74 100.0 SNHG17-252 lncRNA diencephalon (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 20863.00 34.28 59.52 67.08 SNHG14-288 lncRNA diencephalon (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 32591.00 53.56 92.98 91.7 SNHG14-288 lncRNA diencephalon (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 3482.00 4.66 9.93 100.0 SNHG14-295 lncRNA diencephalon (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 5901.00 80.42 16.83 100.0 MEG8-240 lncRNA diencephalon (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 11792.00 26.99 33.64 100.0 SNHG14-303 lncRNA diencephalon (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 4926.00 1.47 14.05 100.0 SNHG14-306 lncRNA diencephalon (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 5898.00 1.76 16.83 100.0 SNHG14-306 lncRNA diencephalon (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 247760.00 73.81 706.84 98.54 SNHG14-306 lncRNA diencephalon (Tissue)