ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 38588.00 94.34 110.09 100.0 MEG8-225 lncRNA diencephalon (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 300486.00 86.00 857.26 100.0 SNHG29-232 lncRNA diencephalon (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 98.00 0.03 0.28 100.0 SNHG29-232 lncRNA diencephalon (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 267.00 0.08 0.76 100.0 SNHG29-232 lncRNA diencephalon (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 2425.00 0.69 6.92 100.0 SNHG29-232 lncRNA diencephalon (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 12713.00 3.64 36.27 100.0 SNHG29-232 lncRNA diencephalon (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 27725.00 7.94 79.10 100.0 SNHG29-232 lncRNA diencephalon (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 1025.00 0.31 2.92 100.0 SNHG14-234 lncRNA diencephalon (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 126954.00 38.64 362.19 96.09 SNHG14-234 lncRNA diencephalon (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 1016.00 0.31 2.90 100.0 SNHG14-234 lncRNA diencephalon (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 23494.00 7.15 67.03 100.0 SNHG14-234 lncRNA diencephalon (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 46176.00 14.05 131.74 100.0 SNHG14-234 lncRNA diencephalon (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 46998.00 14.30 134.08 95.1 SNHG14-234 lncRNA diencephalon (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 2730.00 19.95 7.79 87.87 ENST00000655317 lncRNA diencephalon (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 2216.00 16.20 6.32 100.0 ENST00000655317 lncRNA diencephalon (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 841.00 6.15 2.40 21.41 ENST00000655317 lncRNA diencephalon (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 457.00 3.34 1.30 100.0 ENST00000655317 lncRNA diencephalon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 7621.00 16.40 21.74 92.87 LINC01962-202 lncRNA diencephalon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 34474.00 74.18 98.35 100.0 LINC01962-202 lncRNA diencephalon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 179.00 0.39 0.51 100.0 LINC01962-202 lncRNA diencephalon (Tissue)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 55606.00 19.92 158.64 92.87 SNHG14-241 lncRNA diencephalon (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 112576.00 97.57 321.17 100.0 MEG8-228 lncRNA diencephalon (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 12357.00 29.58 35.25 100.0 SNHG14-254 lncRNA diencephalon (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 12301.00 13.70 35.09 100.0 SNHG14-261 lncRNA diencephalon (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 45986.00 51.21 131.19 89.63 SNHG14-261 lncRNA diencephalon (Tissue)