ENCFF001RLX

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 17435.00 25.73 31.97 100.0 SNORD115-15-201 snoRNA spinal cord (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 676.00 19.39 1.24 100.0 SNORD113-3-201 snoRNA spinal cord (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 19550.00 61.44 35.85 100.0 SNORD52-201 snoRNA spinal cord (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 2291.00 17.34 4.20 32.44 SNORD117-201 snoRNA spinal cord (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 4771.00 36.10 8.75 75.97 SNORD117-201 snoRNA spinal cord (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 55537.00 82.70 101.84 96.34 SNORD114-3-201 snoRNA spinal cord (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 2216.00 3.30 4.06 100.0 SNORD114-3-201 snoRNA spinal cord (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 2616.00 3.90 4.80 100.0 SNORD114-3-201 snoRNA spinal cord (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 27.00 1.05 0.05 100.0 RNA5SP298-201 rRNA pseudogene spinal cord (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 32932.00 43.17 60.39 100.0 SNORD115-38-201 snoRNA spinal cord (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 33029.00 38.91 60.56 100.0 SNORD115-10-201 snoRNA spinal cord (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 24686.00 79.58 45.27 100.0 SNORD113-9-201 snoRNA spinal cord (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 4693.00 46.03 8.61 100.0 SNORD115-20-201 snoRNA spinal cord (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 446.00 1.03 0.82 100.0 SNORD38A-201 snoRNA spinal cord (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 38973.00 90.30 71.46 100.0 SNORD38A-201 snoRNA spinal cord (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 1160.00 2.69 2.13 100.0 SNORD38A-201 snoRNA spinal cord (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 64318.00 85.83 117.94 97.62 SNORD114-20-201 snoRNA spinal cord (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 3114.00 5.14 5.71 64.85 7SK.1-201 misc RNA spinal cord (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 1262.00 2.08 2.31 100.0 7SK.1-201 misc RNA spinal cord (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 3181.00 5.25 5.83 100.0 7SK.1-201 misc RNA spinal cord (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 2608.00 4.30 4.78 100.0 7SK.1-201 misc RNA spinal cord (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 1893.00 3.12 3.47 66.24 7SK.1-201 misc RNA spinal cord (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 44.00 0.07 0.08 100.0 7SK.1-201 misc RNA spinal cord (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 6199.00 10.23 11.37 100.0 7SK.1-201 misc RNA spinal cord (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 6444.00 10.63 11.82 79.24 7SK.1-201 misc RNA spinal cord (Tissue)