ENCFF001RLX

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 471.00 0.72 0.86 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 4785.00 23.34 8.77 35.39 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 172.00 0.84 0.32 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 118.00 0.58 0.22 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 277.00 0.10 0.51 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 34.00 0.01 0.06 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 469.00 0.16 0.86 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 231575.00 79.81 424.63 92.52 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 362.00 0.12 0.66 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 105.00 0.53 0.19 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 15271.00 24.91 28.00 45.48 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 26.00 0.13 0.05 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 545.00 2.40 1.00 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 4850.00 21.39 8.89 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 4842.00 21.35 8.88 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 5.00 0.02 0.01 41.67 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 381.00 0.01 0.70 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 2309.00 26.36 4.23 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 9143.00 37.79 16.77 52.89 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 151.00 0.62 0.28 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 8144.00 33.66 14.93 47.11 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 604.00 16.94 1.11 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 3.00 0.08 0.01 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 1887.00 51.25 3.46 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 10573.00 87.50 19.39 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA spinal cord (Tissue)