ENCFF001RLX

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 394.00 0.02 0.72 77.41 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 295754.00 18.51 542.31 49.27 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 90.00 0.01 0.17 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 22.00 0.00 0.04 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 1014.00 54.49 1.86 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 225.00 0.01 0.41 96.15 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 1761.00 11.72 3.23 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 3598.00 23.95 6.60 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 7574.00 32.33 13.89 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 23.00 0.12 0.04 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 24.00 0.00 0.04 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 6681.00 0.27 12.25 31.06 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 2178.00 31.03 3.99 90.19 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 903.00 12.86 1.66 29.31 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 135.00 1.87 0.25 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 1143718.00 71.65 2097.19 94.42 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 2360.00 0.15 4.33 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 433.00 14.95 0.79 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 121.00 0.62 0.22 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 36.00 0.32 0.07 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 2277.00 3.48 4.18 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 273.00 0.42 0.50 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 165.00 0.25 0.30 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 1308.00 2.00 2.40 99.62 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 101.00 0.15 0.19 18.46 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spinal cord (Tissue)