ENCFF001RLX

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 21163.00 14.25 38.81 73.84 NOP56-219 retained intron spinal cord (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 2261.00 1.52 4.15 100.0 NOP56-219 retained intron spinal cord (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 741.00 0.50 1.36 100.0 NOP56-219 retained intron spinal cord (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 89158.00 60.04 163.49 83.19 NOP56-219 retained intron spinal cord (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 1499.00 11.99 2.75 42.48 RNA5-8SN2-201 rRNA spinal cord (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 31.19 0.25 0.06 49.51 RNA5-8SN2-201 rRNA spinal cord (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 6.00 0.05 0.01 100.0 RNA5-8SN2-201 rRNA spinal cord (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 423.00 3.38 0.78 100.0 RNA5-8SN2-201 rRNA spinal cord (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 252.00 2.02 0.46 100.0 RNA5-8SN2-201 rRNA spinal cord (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 2795.00 22.36 5.13 65.09 RNA5-8SN2-201 rRNA spinal cord (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 41.23 0.33 0.08 65.44 RNA5-8SN2-201 rRNA spinal cord (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 253.00 15.27 0.46 100.0 MIR376A1-201 miRNA spinal cord (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 602.00 36.33 1.10 100.0 MIR376A1-201 miRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 3499.00 1.42 6.42 100.0 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 2411.71 0.98 4.42 37.97 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 138756.00 56.16 254.43 99.0 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 25.00 0.01 0.05 100.0 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 20385.00 8.25 37.38 63.94 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 7374.00 2.98 13.52 58.15 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 3904.00 1.58 7.16 87.49 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 3512.44 1.42 6.44 55.3 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 187.00 0.08 0.34 100.0 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 28.00 0.01 0.05 100.0 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 508.00 0.21 0.93 100.0 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 532.00 0.22 0.98 100.0 U2.3-201 snRNA spinal cord (Tissue)