ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 303.00 0.08 0.98 100.0 SNHG32-223 lncRNA occipital lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 3318.00 0.89 10.75 65.47 SNHG32-223 lncRNA occipital lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 364837.00 97.33 1182.35 100.0 SNHG32-223 lncRNA occipital lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 40344.00 91.67 130.75 97.38 SNHG32-227 lncRNA occipital lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 432.00 0.98 1.40 100.0 SNHG32-227 lncRNA occipital lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 203.00 0.46 0.66 100.0 SNHG32-227 lncRNA occipital lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 293.00 0.67 0.95 100.0 SNHG32-227 lncRNA occipital lobe (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 75.00 77.32 0.24 100.0 B4GALT1-203 nonsense mediated decay occipital lobe (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 539.00 10.17 1.75 100.0 ENST00000722183 lncRNA occipital lobe (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 2120.00 40.00 6.87 88.52 ENST00000722183 lncRNA occipital lobe (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 599.00 11.30 1.94 100.0 ENST00000722183 lncRNA occipital lobe (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 634.00 78.86 2.05 100.0 MIR34BHG-202 lncRNA occipital lobe (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 42681.00 79.44 138.32 83.59 THBS3-AS1-228 lncRNA occipital lobe (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 6.00 54.55 0.02 100.0 MIR200CHG-202 lncRNA occipital lobe (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 790.00 16.76 2.56 100.0 SNHG16-266 lncRNA occipital lobe (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 1256.00 26.64 4.07 100.0 SNHG16-266 lncRNA occipital lobe (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 734.00 15.57 2.38 100.0 SNHG16-266 lncRNA occipital lobe (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 129.00 2.74 0.42 100.0 SNHG16-266 lncRNA occipital lobe (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 50.00 56.18 0.16 100.0 MEG8-261 lncRNA occipital lobe (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 769.00 70.62 2.49 100.0 NR2F2-AS1-327 lncRNA occipital lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 35.00 4.94 0.11 43.21 ENST00000747675 lncRNA occipital lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 124.00 17.51 0.40 100.0 ENST00000747675 lncRNA occipital lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 20.00 2.82 0.06 36.36 ENST00000747675 lncRNA occipital lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 26.00 3.67 0.08 42.62 ENST00000747675 lncRNA occipital lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 76.00 10.73 0.25 100.0 ENST00000747675 lncRNA occipital lobe (Tissue)