ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 41584.00 2.03 134.76 72.85 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 805.00 0.04 2.61 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 259209.00 12.68 840.04 97.59 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 1287.00 0.06 4.17 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 277.00 0.01 0.90 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 3.00 0.00 0.01 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 153675.00 7.52 498.02 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 490.00 0.02 1.59 78.27 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 307.79 0.02 1.00 48.32 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 23.00 0.00 0.07 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 504.00 0.02 1.63 58.27 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 472.00 0.02 1.53 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 492.00 0.02 1.59 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 743.00 0.04 2.41 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 259932.00 37.50 842.38 100.0 SNHG14-315 lncRNA occipital lobe (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 152432.00 21.99 494.00 94.62 SNHG14-315 lncRNA occipital lobe (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 235399.00 33.96 762.87 92.2 SNHG14-315 lncRNA occipital lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 1499.00 0.50 4.86 100.0 SNHG5-273 lncRNA occipital lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 1479.00 0.49 4.79 100.0 SNHG5-273 lncRNA occipital lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 106135.11 35.37 343.96 42.6 SNHG5-273 lncRNA occipital lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 161.00 0.05 0.52 100.0 SNHG5-273 lncRNA occipital lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 238.00 0.08 0.77 100.0 SNHG5-273 lncRNA occipital lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 167190.50 55.71 541.82 61.07 SNHG5-273 lncRNA occipital lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 9539.00 3.18 30.91 85.58 SNHG5-273 lncRNA occipital lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 169.00 0.06 0.55 100.0 SNHG5-273 lncRNA occipital lobe (Tissue)