ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 11584.00 3.70 37.54 100.0 MIR99AHG-262 lncRNA occipital lobe (Tissue)
ENST00000660376.1 ENST00000660376.1_1_78_+ 1–78 1679.00 9.09 5.44 100.0 SNHG14-266 lncRNA occipital lobe (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 841.00 69.68 2.73 100.0 SNHG14-270 lncRNA occipital lobe (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 658.00 0.25 2.13 100.0 SNHG14-275 lncRNA occipital lobe (Tissue)
ENST00000661688.1 ENST00000661688.1_965_986_+ 965–986 2418.00 0.49 7.84 100.0 MIR9-2HG-225 lncRNA occipital lobe (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 438943.00 88.08 1422.51 90.92 MIR9-2HG-225 lncRNA occipital lobe (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 47.00 7.79 0.15 100.0 MEG8-233 lncRNA occipital lobe (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 285.00 47.26 0.92 100.0 MEG8-233 lncRNA occipital lobe (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 2628.00 22.74 8.52 100.0 SNHG14-278 lncRNA occipital lobe (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 1398.00 12.10 4.53 89.56 SNHG14-278 lncRNA occipital lobe (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 450.00 47.47 1.46 100.0 MEG8-234 lncRNA occipital lobe (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 121.00 12.76 0.39 100.0 MEG8-234 lncRNA occipital lobe (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 982.00 84.66 3.18 100.0 SNHG17-252 lncRNA occipital lobe (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 6692.00 29.73 21.69 73.34 SNHG14-288 lncRNA occipital lobe (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 13564.00 60.25 43.96 91.37 SNHG14-288 lncRNA occipital lobe (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 1608.00 9.71 5.21 100.0 SNHG14-295 lncRNA occipital lobe (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 975.00 82.70 3.16 100.0 MEG8-240 lncRNA occipital lobe (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 194.00 1.91 0.63 100.0 SNHG14-303 lncRNA occipital lobe (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 1899.00 2.75 6.15 100.0 SNHG14-306 lncRNA occipital lobe (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 1086.00 1.57 3.52 100.0 SNHG14-306 lncRNA occipital lobe (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 49498.00 71.77 160.41 96.72 SNHG14-306 lncRNA occipital lobe (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 1744.00 2.53 5.65 100.0 SNHG14-306 lncRNA occipital lobe (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 43.00 1.11 0.14 100.0 ENST00000666735 lncRNA occipital lobe (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 1451.00 37.56 4.70 100.0 ENST00000666735 lncRNA occipital lobe (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 1496.00 84.09 4.85 100.0 MEG8-242 lncRNA occipital lobe (Tissue)