ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 798.00 0.33 2.59 100.0 SNHG29-232 lncRNA occipital lobe (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 9937.00 4.05 32.20 100.0 SNHG29-232 lncRNA occipital lobe (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 22843.00 9.32 74.03 100.0 SNHG29-232 lncRNA occipital lobe (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 587.00 0.37 1.90 100.0 SNHG14-234 lncRNA occipital lobe (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 66338.00 42.21 214.99 95.37 SNHG14-234 lncRNA occipital lobe (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 523.00 0.33 1.69 100.0 SNHG14-234 lncRNA occipital lobe (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 11743.00 7.47 38.06 100.0 SNHG14-234 lncRNA occipital lobe (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 21850.00 13.90 70.81 100.0 SNHG14-234 lncRNA occipital lobe (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 24490.00 15.58 79.37 96.06 SNHG14-234 lncRNA occipital lobe (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 1442.00 3.62 4.67 55.48 ENST00000655317 lncRNA occipital lobe (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 7001.00 17.57 22.69 100.0 ENST00000655317 lncRNA occipital lobe (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 2225.00 5.59 7.21 41.69 ENST00000655317 lncRNA occipital lobe (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 2010.00 5.05 6.51 100.0 ENST00000655317 lncRNA occipital lobe (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 163.00 6.17 0.53 89.07 LINC01962-202 lncRNA occipital lobe (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 1932.00 73.10 6.26 100.0 LINC01962-202 lncRNA occipital lobe (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 134.00 5.07 0.43 100.0 LINC01962-202 lncRNA occipital lobe (Tissue)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 24634.00 28.25 79.83 92.45 SNHG14-241 lncRNA occipital lobe (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 6827.00 95.43 22.12 100.0 MEG8-228 lncRNA occipital lobe (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 3334.00 19.95 10.80 100.0 SNHG14-254 lncRNA occipital lobe (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 6866.00 24.28 22.25 100.0 SNHG14-261 lncRNA occipital lobe (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 10794.00 38.17 34.98 89.15 SNHG14-261 lncRNA occipital lobe (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 3.00 0.28 0.01 100.0 LIMD1-AS1-204 lncRNA occipital lobe (Tissue)
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 2.00 0.18 0.01 100.0 LIMD1-AS1-204 lncRNA occipital lobe (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 248.00 22.77 0.80 82.39 LIMD1-AS1-204 lncRNA occipital lobe (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 261189.00 83.50 846.45 96.31 MIR99AHG-262 lncRNA occipital lobe (Tissue)