ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 13883.81 23.32 44.99 26.71 SNHG14-312 lncRNA occipital lobe (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 37725.04 63.37 122.26 72.59 SNHG14-312 lncRNA occipital lobe (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 711.00 1.19 2.30 100.0 SNHG14-312 lncRNA occipital lobe (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 74.00 0.36 0.24 100.0 MEG8-244 lncRNA occipital lobe (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 130.00 0.64 0.42 100.0 MEG8-244 lncRNA occipital lobe (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 19856.00 97.62 64.35 99.85 MEG8-244 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 413.00 0.02 1.34 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 10.00 0.00 0.03 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 4828.00 0.24 15.65 99.32 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 311.06 0.02 1.01 48.83 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 1158.00 0.06 3.75 90.97 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 1034804.00 50.63 3353.56 98.9 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 865.00 0.04 2.80 70.73 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 49764.00 2.43 161.27 99.56 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 7095.00 0.35 22.99 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 356946.00 17.47 1156.78 99.64 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 255.00 0.01 0.83 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 1721.00 0.08 5.58 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 1021.00 0.05 3.31 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 1603.00 0.08 5.19 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 240.00 0.01 0.78 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 279.00 0.01 0.90 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 12808.00 0.63 41.51 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 212.00 0.01 0.69 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 1400.00 0.07 4.54 100.0 SNHG1-248 lncRNA occipital lobe (Tissue)