ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 47.00 4.04 0.15 54.65 CTC1-214 protein coding occipital lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 5.00 0.43 0.02 6.85 CTC1-214 protein coding occipital lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 92.00 7.90 0.30 56.1 CTC1-214 protein coding occipital lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 39.00 3.35 0.13 45.35 CTC1-214 protein coding occipital lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 216.00 18.56 0.70 85.71 CTC1-214 protein coding occipital lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 16.00 1.37 0.05 100.0 CTC1-214 protein coding occipital lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 17.00 1.46 0.06 100.0 CTC1-214 protein coding occipital lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 283.00 24.31 0.92 100.0 CTC1-214 protein coding occipital lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 433.00 2.73 1.40 83.11 ENST00000651540 lncRNA occipital lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 488.00 3.08 1.58 99.59 ENST00000651540 lncRNA occipital lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 972.00 6.14 3.15 100.0 ENST00000651540 lncRNA occipital lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 543.00 3.43 1.76 54.08 ENST00000651540 lncRNA occipital lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 163.00 1.03 0.53 100.0 ENST00000651540 lncRNA occipital lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 398.00 2.51 1.29 100.0 ENST00000651540 lncRNA occipital lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 313.00 1.98 1.01 100.0 ENST00000651540 lncRNA occipital lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 343.00 2.17 1.11 100.0 ENST00000651540 lncRNA occipital lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 457.00 2.89 1.48 100.0 ENST00000651540 lncRNA occipital lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 1828.00 11.54 5.92 53.23 ENST00000651540 lncRNA occipital lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 1284.00 8.11 4.16 100.0 ENST00000651540 lncRNA occipital lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 3741.00 23.62 12.12 83.6 ENST00000651540 lncRNA occipital lobe (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 8305.00 1.45 26.91 100.0 MIRLET7A1HG-203 lncRNA occipital lobe (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 2853.00 91.27 9.25 100.0 MEG8-225 lncRNA occipital lobe (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 207704.00 84.75 673.12 100.0 SNHG29-232 lncRNA occipital lobe (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 128.00 0.05 0.41 100.0 SNHG29-232 lncRNA occipital lobe (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 317.00 0.13 1.03 100.0 SNHG29-232 lncRNA occipital lobe (Tissue)