ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 13421.00 79.69 43.49 93.93 MIR130A-201 miRNA occipital lobe (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 183635.00 98.43 595.12 99.18 MIRLET7F2-201 miRNA occipital lobe (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 199.00 69.34 0.64 100.0 MIR652-201 miRNA occipital lobe (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 3.00 100.00 0.01 100.0 MIR653-201 miRNA occipital lobe (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 613.00 57.29 1.99 100.0 MIR140-201 miRNA occipital lobe (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 501.00 21.77 1.62 100.0 MIR106B-201 miRNA occipital lobe (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 404.00 17.56 1.31 69.78 MIR106B-201 miRNA occipital lobe (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 33673.00 72.27 109.13 98.74 SNORD83A-201 snoRNA occipital lobe (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 11717.00 25.15 37.97 95.81 SNORD83A-201 snoRNA occipital lobe (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 705.00 77.39 2.28 100.0 SNORD41-201 snoRNA occipital lobe (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 4.00 0.20 0.01 100.0 MT-TF-201 Mt tRNA occipital lobe (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 1.00 0.05 0.00 50.0 MT-TF-201 Mt tRNA occipital lobe (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 12.00 0.60 0.04 80.0 MT-TF-201 Mt tRNA occipital lobe (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 393.00 10.82 1.27 100.0 MT-TV-201 Mt tRNA occipital lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 3070.00 18.25 9.95 81.65 MT-RNR2-201 Mt rRNA occipital lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 35.00 0.21 0.11 100.0 MT-RNR2-201 Mt rRNA occipital lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 51.00 0.30 0.17 100.0 MT-RNR2-201 Mt rRNA occipital lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 183.00 1.09 0.59 100.0 MT-RNR2-201 Mt rRNA occipital lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 233.00 1.39 0.76 100.0 MT-RNR2-201 Mt rRNA occipital lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 6.00 0.04 0.02 100.0 MT-RNR2-201 Mt rRNA occipital lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 3227.00 19.19 10.46 93.27 MT-RNR2-201 Mt rRNA occipital lobe (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 417.00 15.15 1.35 83.9 MT-TI-201 Mt tRNA occipital lobe (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 521.00 18.93 1.69 100.0 MT-TI-201 Mt tRNA occipital lobe (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 262.00 10.04 0.85 71.2 MT-TQ-201 Mt tRNA occipital lobe (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 173.39 6.65 0.56 64.7 MT-TQ-201 Mt tRNA occipital lobe (Tissue)