ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 35.00 4.61 0.11 100.0 MIR500A-201 miRNA occipital lobe (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 527.00 69.43 1.71 100.0 MIR500A-201 miRNA occipital lobe (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 2230.00 15.48 7.23 100.0 MIR30A-201 miRNA occipital lobe (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 109.00 0.76 0.35 100.0 MIR30A-201 miRNA occipital lobe (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 7801.00 54.15 25.28 94.39 MIR30A-201 miRNA occipital lobe (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 3549.00 24.64 11.50 88.44 MIR30A-201 miRNA occipital lobe (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 36068.00 91.41 116.89 93.38 MIR27B-201 miRNA occipital lobe (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 154.00 0.39 0.50 100.0 MIR27B-201 miRNA occipital lobe (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 2.00 66.67 0.01 100.0 MIR196A2-201 miRNA occipital lobe (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 90.00 62.94 0.29 100.0 MIR577-201 miRNA occipital lobe (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 2112.00 85.64 6.84 89.99 MIR654-201 miRNA occipital lobe (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 50572.00 93.72 163.89 95.25 MIR204-201 miRNA occipital lobe (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 619.00 92.94 2.01 100.0 MIR152-201 miRNA occipital lobe (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 264.00 61.83 0.86 100.0 MIR138-1-201 miRNA occipital lobe (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 6365.00 95.06 20.63 100.0 MIR30C1-201 miRNA occipital lobe (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 411.00 79.65 1.33 100.0 MIR660-201 miRNA occipital lobe (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 264520.00 85.41 857.25 96.35 MIR125B1-201 miRNA occipital lobe (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 6407.00 2.07 20.76 100.0 MIR125B1-201 miRNA occipital lobe (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 22.00 40.00 0.07 100.0 MIR493-201 miRNA occipital lobe (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 26.00 47.27 0.08 100.0 MIR493-201 miRNA occipital lobe (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 1031.46 35.67 3.34 37.64 MIR182-201 miRNA occipital lobe (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 1893.41 65.47 6.14 73.44 MIR182-201 miRNA occipital lobe (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 254839.00 95.02 825.87 96.05 MIR100-201 miRNA occipital lobe (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 504.00 89.05 1.63 100.0 MIR301A-201 miRNA occipital lobe (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 3284.00 19.50 10.64 32.69 MIR130A-201 miRNA occipital lobe (Tissue)