ENCFF001RLW
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | occipital lobe (Tissue) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR000AFX |
| Description: | Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000387372.1 | ENST00000387372.1_1_36_+ | 1–36 | 262.00 | 10.04 | 0.85 | 71.2 | MT-TQ-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387372.1 | ENST00000387372.1_1_32_+ | 1–32 | 565.41 | 21.67 | 1.83 | 74.99 | MT-TQ-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387377.1 | ENST00000387377.1_1_51_+ | 1–51 | 516.00 | 11.92 | 1.67 | 100.0 | MT-TM-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387377.1 | ENST00000387377.1_1_31_+ | 1–31 | 1015.00 | 23.45 | 3.29 | 90.14 | MT-TM-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387405.1 | ENST00000387405.1_1_24_+ | 1–24 | 45.00 | 9.09 | 0.15 | 100.0 | MT-TC-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_65_+ | 1–65 | 1850.00 | 17.19 | 6.00 | 100.0 | MT-TY-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_50_+ | 1–50 | 3.00 | 0.03 | 0.01 | 100.0 | MT-TY-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_32_+ | 1–32 | 649.00 | 6.03 | 2.10 | 13.01 | MT-TY-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_56_+ | 1–56 | 94.00 | 0.87 | 0.30 | 100.0 | MT-TY-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_37_+ | 1–37 | 2468.00 | 22.94 | 8.00 | 83.01 | MT-TY-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_28_+ | 1–28 | 69.00 | 0.64 | 0.22 | 100.0 | MT-TY-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387419.1 | ENST00000387419.1_1_51_+ | 1–51 | 3.00 | 2.01 | 0.01 | 100.0 | MT-TD-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_52_+ | 1–52 | 651.00 | 22.55 | 2.11 | 100.0 | MT-TK-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_28_+ | 1–28 | 97.00 | 3.36 | 0.31 | 100.0 | MT-TK-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_31_+ | 1–31 | 12.00 | 0.42 | 0.04 | 100.0 | MT-TK-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_58_+ | 1–58 | 451.00 | 15.62 | 1.46 | 100.0 | MT-TK-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_53_+ | 1–53 | 309.00 | 4.10 | 1.00 | 100.0 | MT-TS2-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_20_+ | 1–20 | 187.00 | 2.48 | 0.61 | 76.02 | MT-TS2-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_26_+ | 1–26 | 111.00 | 1.47 | 0.36 | 100.0 | MT-TS2-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387456.1 | ENST00000387456.1_1_31_+ | 1–31 | 602.00 | 37.11 | 1.95 | 100.0 | MT-TL2-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_1_57_+ | 1–57 | 174.00 | 0.05 | 0.56 | 100.0 | MT-TE-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_13_67_+ | 13–67 | 254.00 | 0.08 | 0.82 | 100.0 | MT-TE-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_1_62_+ | 1–62 | 237.00 | 0.07 | 0.77 | 76.7 | MT-TE-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_40_67_+ | 40–67 | 52.00 | 0.02 | 0.17 | 14.33 | MT-TE-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_39_69_+ | 39–69 | 311.00 | 0.10 | 1.01 | 87.85 | MT-TE-201 | Mt tRNA | occipital lobe (Tissue) |