ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 5219.00 0.72 14.16 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 10194.00 1.41 27.65 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 72.00 0.01 0.20 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 767.00 12.08 2.08 100.0 FTX-219 lncRNA tongue (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 3231.00 50.87 8.76 77.44 FTX-219 lncRNA tongue (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 328.00 2.06 0.89 42.21 CTC1-214 protein coding tongue (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 167.00 1.05 0.45 66.53 CTC1-214 protein coding tongue (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 4700.00 29.54 12.75 69.23 CTC1-214 protein coding tongue (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 449.00 2.82 1.22 57.79 CTC1-214 protein coding tongue (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 3546.00 22.29 9.62 81.54 CTC1-214 protein coding tongue (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 1786.00 11.23 4.84 100.0 CTC1-214 protein coding tongue (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 1672.00 10.51 4.54 100.0 CTC1-214 protein coding tongue (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 224.00 1.41 0.61 100.0 CTC1-214 protein coding tongue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 4857.00 4.00 13.18 72.83 ENST00000651540 lncRNA tongue (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 2900.00 2.39 7.87 99.11 ENST00000651540 lncRNA tongue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 2764.00 2.28 7.50 100.0 ENST00000651540 lncRNA tongue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 4526.00 3.73 12.28 46.36 ENST00000651540 lncRNA tongue (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 3094.00 2.55 8.39 100.0 ENST00000651540 lncRNA tongue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 2060.00 1.70 5.59 100.0 ENST00000651540 lncRNA tongue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 606.00 0.50 1.64 100.0 ENST00000651540 lncRNA tongue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 1493.00 1.23 4.05 100.0 ENST00000651540 lncRNA tongue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 3665.00 3.02 9.94 100.0 ENST00000651540 lncRNA tongue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 11754.00 9.69 31.89 57.28 ENST00000651540 lncRNA tongue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 3629.00 2.99 9.84 100.0 ENST00000651540 lncRNA tongue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 20802.00 17.14 56.43 79.57 ENST00000651540 lncRNA tongue (Tissue)