ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 252.00 2.72 0.68 100.0 HSPA9-211 retained intron tongue (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 1594.00 17.22 4.32 37.17 HSPA9-211 retained intron tongue (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 182062.00 92.00 493.89 100.0 DNM3OS-205 lncRNA tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 5939.00 0.82 16.11 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 75.00 0.01 0.20 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 3629.00 0.50 9.84 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 2732.00 0.38 7.41 77.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 10650.00 1.47 28.89 90.75 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 15.00 0.00 0.04 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 174.00 0.02 0.47 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 276.00 0.04 0.75 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 448058.00 61.82 1215.47 99.77 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 922.00 0.13 2.50 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 2892.00 0.40 7.85 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 702.00 0.10 1.90 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 786.00 0.11 2.13 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 1199.00 0.17 3.25 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 573.00 0.08 1.55 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 722.00 0.10 1.96 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 266.00 0.04 0.72 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 8903.00 1.23 24.15 82.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 40702.00 5.62 110.41 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 46567.00 6.43 126.32 95.36 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 83951.00 11.58 227.74 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 447.00 0.06 1.21 100.0 GAS5-230 retained intron tongue (Tissue)