ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 1614.00 72.41 4.38 100.0 MIR497HG-207 lncRNA tongue (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 526527.00 99.45 1428.34 99.82 MIR22HG-212 lncRNA tongue (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 124.00 0.25 0.34 43.66 SNORD53B-201 snoRNA tongue (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 44590.00 90.85 120.96 95.0 SNORD53B-201 snoRNA tongue (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 160.00 0.33 0.43 56.34 SNORD53B-201 snoRNA tongue (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 2127.00 92.52 5.77 100.0 ENST00000578036 lncRNA tongue (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 3441.00 82.86 9.33 100.0 RPL23A-207 protein coding tongue (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 391.00 79.96 1.06 100.0 MIR744-201 miRNA tongue (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 4244.00 69.60 11.51 100.0 MIR378C-201 miRNA tongue (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 3406.00 60.77 9.24 68.28 MIR142HG-201 lncRNA tongue (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 26.00 0.46 0.07 100.0 MIR142HG-201 lncRNA tongue (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 181.00 3.23 0.49 8.14 MIR142HG-201 lncRNA tongue (Tissue)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 103.00 0.89 0.28 100.0 SNORD3C-201 snoRNA tongue (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 256.26 0.10 0.70 46.26 RPL23A-208 retained intron tongue (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 211896.00 79.06 574.82 90.38 RPL23A-208 retained intron tongue (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 47977.00 17.90 130.15 89.92 RPL23A-208 retained intron tongue (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 473.88 0.18 1.29 63.87 RPL23A-208 retained intron tongue (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 14794.00 1.93 40.13 100.0 MIR133A1HG-202 lncRNA tongue (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 3499.00 3.86 9.49 41.65 RPL17-211 retained intron tongue (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 10135.00 11.19 27.49 42.44 RPL17-211 retained intron tongue (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 27.00 0.03 0.07 100.0 RPL17-211 retained intron tongue (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 47215.00 52.12 128.08 94.27 RPL17-211 retained intron tongue (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 23613.00 26.06 64.06 97.28 RPL17-211 retained intron tongue (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 9891.00 55.51 26.83 73.01 ENST00000582320 lncRNA tongue (Tissue)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 2060.00 11.56 5.59 100.0 ENST00000582320 lncRNA tongue (Tissue)