ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 597.00 5.54 1.62 100.0 ENST00000554988 lncRNA tongue (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 537.00 0.78 1.46 100.0 SNHG14-220 retained intron tongue (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 29792.00 43.32 80.82 100.0 SNHG14-220 retained intron tongue (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 34473.00 50.12 93.52 100.0 SNHG14-220 retained intron tongue (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 211.00 0.31 0.57 100.0 SNHG14-220 retained intron tongue (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 5013.00 99.64 13.60 100.0 TEKT4P2-201 transcribed unprocessed pseudogene tongue (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 689.00 0.68 1.87 100.0 RPL4-202 retained intron tongue (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 415.00 0.41 1.13 100.0 RPL4-202 retained intron tongue (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 28.00 0.03 0.08 100.0 RPL4-202 retained intron tongue (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 90910.00 89.62 246.62 98.6 RPL4-202 retained intron tongue (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 181.00 0.18 0.49 100.0 RPL4-202 retained intron tongue (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 86.00 1.27 0.23 100.0 RPL4-207 retained intron tongue (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 3525.00 52.11 9.56 100.0 RPL4-207 retained intron tongue (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 275885.00 92.48 748.41 97.64 ENST00000565336 lncRNA tongue (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 5242.00 1.76 14.22 57.47 ENST00000565336 lncRNA tongue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 761.00 0.45 2.06 100.0 RBMX-210 retained intron tongue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 134993.00 80.48 366.20 85.13 RBMX-210 retained intron tongue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 222.00 0.13 0.60 100.0 RBMX-210 retained intron tongue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 1036.00 0.62 2.81 100.0 RBMX-210 retained intron tongue (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 3076.00 47.76 8.34 100.0 RPL4-214 retained intron tongue (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 408.00 6.33 1.11 100.0 RPL4-214 retained intron tongue (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 1064.00 0.60 2.89 100.0 POLG-DT-202 lncRNA tongue (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 19350.99 10.97 52.49 13.05 POLG-DT-202 lncRNA tongue (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 119564.49 67.75 324.35 75.48 POLG-DT-202 lncRNA tongue (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 10826.00 70.09 29.37 100.0 ENST00000570843 lncRNA tongue (Tissue)